PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06274.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 707aa    MW: 78363.9 Da    PI: 6.7868
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.11.7e-194095156
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                r++ +++t++q++++ee+F+++++p+ ++r+eL++ lg++  qVk+WFqN+R+++k
  PIN06274.1 40 RKRYHRHTPHQIQQMEEFFKECPHPDDRQRKELSRVLGMEPLQVKFWFQNKRTQMK 95
                789999***********************************************999 PP
2START172.82.2e-542264441203
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                 ela +a++el++ al +ep+W  s       +n++e+l++f++  +      +++ea+++s+vv m++a++ve+l+d+  qW + +     +a++le i
  PIN06274.1 226 ELAIAAMDELMRIALQGEPLWLPSMdqntCLLNEEEYLRSFSR-IFgpklkgFKSEASKESVVVAMNSADVVEILMDVD-QWANVFSglvsRATILEII 322
                 57899********************65555579********76.44799999***************************.******************* PP

                 CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX CS
       START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp 177
                 s g      +alq+m+ae+q++splvp Rd++fvRy++q+ +g+ ++vdvS d+ q+ p   + v ++++pS+ +++++ ng+skvtwvehv++++r +
  PIN06274.1 323 SCGvggnynEALQVMNAEFQVPSPLVPvRDSYFVRYCKQHMEGTSAVVDVSFDHLQCSP---PPVTCRRRPSCVVVQDMRNGYSKVTWVEHVEVEDRGI 418
                 *********************************************************77...68999******************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHTXXX CS
       START 178 hwllrslvksglaegaktwvatlqrq 203
                 h+++++l+  gla+gak+wva l  +
  PIN06274.1 419 HNIYKPLITAGLAFGAKRWVAILVGH 444
                 *********************98655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 707 aa     Download sequence    
MRSDMSKYDE VEHMKNEESD SKSDSDNSNV NSIEVQPSKR KRYHRHTPHQ IQQMEEFFKE  60
CPHPDDRQRK ELSRVLGMEP LQVKFWFQNK RTQMKTQHEH QENTQLRIEN ERLRAENMRY  120
REALSNASCP SCGIPTPIAA ETSFHEQQLR VENARLQEEI DHISAIATKY VGKPFKNFMD  180
ASSSTTPHVI SLSSAGNFKE SSEATDLESL TNDVRRSASY GPIVIELAIA AMDELMRIAL  240
QGEPLWLPSM DQNTCLLNEE EYLRSFSRIF GPKLKGFKSE ASKESVVVAM NSADVVEILM  300
DVDQWANVFS GLVSRATILE IISCGVGGNY NEALQVMNAE FQVPSPLVPV RDSYFVRYCK  360
QHMEGTSAVV DVSFDHLQCS PPPVTCRRRP SCVVVQDMRN GYSKVTWVEH VEVEDRGIHN  420
IYKPLITAGL AFGAKRWVAI LVGHSQRTAI LAAATKISSN EANHLANQEG IKGMLKLAER  480
MVTRFCCGVG ASTSNAWTTL SGNGTDNVKV MTRKNLDDPS MPFGVQLNIA TSFWLPIPPK  540
RVFDFLRDHC TRKKWDMLWN GGDFKEIAHV TSGKEVGNRV SIYQGGNPSQ SKMIMLQESR  600
TDPTASYVVY GPVDTVSMNA ILGGGDPSYA PLLPSGFAIL PDGPTGGQGR GMPPQAETGG  660
SLLTVALQVL VDSSPNAKPS MGSIAAANNL ISCTIDNIKK ALIPNSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.30.0HD-ZIP family protein