PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06283.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Dof

Protein Properties

Length: 307aa MW: 32569.8 Da PI: 6.6563

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	8.2e-39	33	93	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+++ PIN06283.1 33 NQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRAK 93 57899****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MQDIHTIGGG AGGGGGRFFG GGDRRLRPHN HPNQQALKCP RCDSLNTKFC YYNNYNLSQP 60 RHFCKSCRRY WTKGGVLRNV PVGGGCRKTK RAKQKSSGGD ASSAIAPIER SSKAQSSSSE 120 SSSLTAATTA ATPTSATTVL AEEGSAPSNK VTNLYNFPEA RFFNANPGFD HQPMVNQSTP 180 DGQIFTTEMG NFTSLMASSS AEMMGFGIAD IPTRSYGRVQ QENQAPVSDN SCLGMVGPTA 240 VDEYQMPEMT NDGFAAAALD WGSGGDGVGG GGSVGEQGLF DLTAAVDPAY WSQPQWTDND 300 QSLNYLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	13	22	GGGGRFFGGG
2	14	23	GGGGRFFGGG
3	15	24	GGGGRFFGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	4e-49	Dof family protein