PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06286.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 484aa MW: 52988.6 Da PI: 7.7886

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	57.3	2.8e-18	198	247	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f++Lre++P++ ++K +Ka+ L ++++YI+ Lq PIN06286.1 198 RSKHSATEQRRRSKINDRFQKLREIIPNS----DQKRDKASFLLEVIDYIQFLQ 247 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MSAVDRPPVP ASPASVEHLL PGGIGTYSIS YFNQRVLKPE GSLFSAQASS TNRNDENSNC 60 SSYSGSGSGF TLWDESAVKK GKTGKENIVA DRHILREAGV NIVGGQWASL LEKPSQSSSN 120 HKHNISTFSS FSSSQPSSSQ KNQSFMDMIT SAKNDQEEDD EEEEEEFVIK REPLSHPKGN 180 LSVKIEAKNT DQKPNTPRSK HSATEQRRRS KINDRFQKLR EIIPNSDQKR DKASFLLEVI 240 DYIQFLQEKV NRYESSYNVW NHEPSKMLQW QRNCHIAEGF IDHTGGAKTD SGPASMVYAT 300 KFDENKGGVS PSLPINGQNL VDSDISTATT LKERSQQPEL TSKAAQVQPN IFSFGRAAIA 360 ASPVSPKHAS DTHKTMTWPQ LNRSCTANKM KDQEVTIESG TINISSVYSQ GLLNTLTQAL 420 HNSGVDLSQA SISVQIDLGK KANGVPHSSP STAKDDDVPA GLPRSRAAIT GDDFGHALKR 480 LRTS

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MSAVDRPPVP ASPASVEHLL PGGIGTYSIS YFNQRVLKPE GSLFSAQASS TNRNDENSNC  60
SSYSGSGSGF TLWDESAVKK GKTGKENIVA DRHILREAGV NIVGGQWASL LEKPSQSSSN  120
HKHNISTFSS FSSSQPSSSQ KNQSFMDMIT SAKNDQEEDD EEEEEEFVIK REPLSHPKGN  180
LSVKIEAKNT DQKPNTPRSK HSATEQRRRS KINDRFQKLR EIIPNSDQKR DKASFLLEVI  240
DYIQFLQEKV NRYESSYNVW NHEPSKMLQW QRNCHIAEGF IDHTGGAKTD SGPASMVYAT  300
KFDENKGGVS PSLPINGQNL VDSDISTATT LKERSQQPEL TSKAAQVQPN IFSFGRAAIA  360
ASPVSPKHAS DTHKTMTWPQ LNRSCTANKM KDQEVTIESG TINISSVYSQ GLLNTLTQAL  420
HNSGVDLSQA SISVQIDLGK KANGVPHSSP STAKDDDVPA GLPRSRAAIT GDDFGHALKR  480
LRTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	2e-90	bHLH family protein