PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06291.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family M-type_MADS
Protein Properties Length: 62aa    MW: 7114.32 Da    PI: 10.5411
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF977.7e-31959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krie  s rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++g+lye+ss
  PIN06291.1  9 KRIETASSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSQKGRLYEFSS 59
                79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 62 aa     Download sequence    
MVRGKVEMKR IETASSRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSQ KGRLYEFSSS  60
KE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.48e-35MIKC_MADS family protein