PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06297.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 179aa    MW: 20731.1 Da    PI: 9.8398
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.71.1e-33100158159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+++v++tYeg H h+
  PIN06297.1 100 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSKDEEIVVTTYEGMHSHP 158
                 59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MDNYQTMFHS SSSSSSSSTI PQSSHLSLLN YMVMNSHAQD HQYLTVDNTH SQGNNTATFE  60
GNNSIIIDMK NETKPRKKKG DKGSKKARYA FETRSQVDIL DDGYRWRKYG QKAVKNNKFP  120
RSYYRCTHQG CNVKKQVQRL SKDEEIVVTT YEGMHSHPIQ TSTDNFEHIL KQMRIYSSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.11e-58WRKY family protein