PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06360.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 219aa MW: 25767.6 Da PI: 6.5128

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06360.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.5	3e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv+++ q+G g+W++++++ g++R +k+c++rw +yl PIN06360.1 14 KGPWTPEEDRMLVEYISQYGEGRWSSVSKCTGLKRNGKSCRLRWVNYL 61 79****************************9***********97 PP
2	Myb_DNA-binding	51.5	2.3e-16	68	111	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ PIN06360.1 68 GHLTPQEEGIIIELHALWGNR-WSTIARYLP-GRTDNEIKNYWRTH 111 667****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MVQMGAYDQE GWKKGPWTPE EDRMLVEYIS QYGEGRWSSV SKCTGLKRNG KSCRLRWVNY 60 LRPGLKKGHL TPQEEGIIIE LHALWGNRWS TIARYLPGRT DNEIKNYWRT HFKKRKQENK 120 TILTQQQQEE INQNKNFNKL TSTDENNINQ ETATVHPSNE NHQIVPTIYQ DSDLWSDFVP 180 MDCYLWDGLW NLDDQDGCSK DENRANVGDY FQSGGYIFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	7e-66	MYB family protein