PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06383.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 212aa    MW: 23574.8 Da    PI: 6.3012
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.1e-121965354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r+h+e+ErrRR+riN  +++Lr+l+P        K++Ka+ L ++++ +k+L
  PIN06383.1 19 RNHSEAERRRRERINGHLATLRSLIPGT-----NKMDKAALLAEVINQVKEL 65
                58*************************6.....5************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MGKPAQKVVN AEKALMALRN HSEAERRRRE RINGHLATLR SLIPGTNKMD KAALLAEVIN  60
QVKELRRTVA EATDGTLVPT DMDEVKVEEQ EDLNDGAFIS IRASLCCDFK HELLVDLREA  120
IEALPLKTVR AEIATLGSRM VNIFVISGCN EGESDEGEEG IKLVKSVRDA LRSVLDKFYA  180
SEEFSSRNTL SGKRRRVSFF SPTNSSSLGD IW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12530ERRRRE
2193197KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-39bHLH family protein