PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06426.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 191aa    MW: 21564.9 Da    PI: 5.354
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.97.6e-161256147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+WT+eEd+ll+++++q+G g W+ ++ + g  Rt++++k++w+++
       PIN06426.1 12 KGAWTKEEDDLLKKCIEQHGEGKWHQVPLRAG--RTANDIKNFWNTH 56
                     79*****************************8..***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MENNGRQLEA RKGAWTKEED DLLKKCIEQH GEGKWHQVPL RAGRTANDIK NFWNTHIEKH  60
IKSVGAGLGG ETEKCTRAKI ITKSNIIRPL PRTFSKLPGC PSTTDHQRSK TNNENPKDKL  120
QPSSSTVSLS QDQDTINGWT NDDPDECIRW WSSLLEITET GEPTPLSFSD EDYQIILSPG  180
LGDAIDYTYQ E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.14e-17MYB family protein