PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06464.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family LBD
Protein Properties Length: 193aa    MW: 21369.2 Da    PI: 4.9536
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06464.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260133.67.7e-42291281100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrr+C+++Cvlapyfp ++p kf  +h++FGasn++k+l++lpe +r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+++la++++
  PIN06464.1  29 PCAACKILRRRCVEKCVLAPYFPPNDPLKFTTAHRVFGASNMIKFLQELPEPQRADAVSSMVYEAKARLRDPVYGCAGAICQLQKQVSELQEQLAKAQA 127
                 7***********************************************************************************************998 PP

      DUF260 100 e 100
                 e
  PIN06464.1 128 E 128
                 7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MEISETNTAT ITSQSSSSSS PPQSVVISPC AACKILRRRC VEKCVLAPYF PPNDPLKFTT  60
AHRVFGASNM IKFLQELPEP QRADAVSSMV YEAKARLRDP VYGCAGAICQ LQKQVSELQE  120
QLAKAQAEII NMQSQNANLM ALICMEMTQS SPSMPSNDHQ SFDDFNSSPH SYQSNTSFLD  180
ENNLGVLWEP LWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28500.17e-71LBD family protein