PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06555.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HB-other

Protein Properties

Length: 1659aa MW: 186363 Da PI: 5.1193

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.3	6.2e-19	23	79	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le+ ++++ yps+++r+eL++kl+Lt+rq ++WF+ rR k+kk PIN06555.1 23 RPKRQMKTPFQLEVLEKTYAMETYPSEATRAELSQKLDLTDRQLQMWFCHRRLKDKK 79 579****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1659 aa Download sequence
MEAGSDGEIN KNMNQSSAEG SKRPKRQMKT PFQLEVLEKT YAMETYPSEA TRAELSQKLD 60 LTDRQLQMWF CHRRLKDKKE AVSMAAMKPR TSGSVGRKGL TDSPREELMT AEPASGHGSG 120 PASASASGSG SGSGSSEFDN GDDTPMVPMR YYDSPRTIME RRVIACVEAQ LGEPLREDGP 180 ILGVEFDELP PGAFGAPIVP AEQQDRYRHS YDSKLYGQYD AKHIKAASNG PHEAVESKTR 240 TDVYGHVAQS SYLYDPPVDG PTPKSLSVMH VNGHLPREHG VEGQPSSMDV YSQHGRQMHF 300 SSPPRNTEFI THNNDNLHME RKRKSDEARI GREVQAHEKR IRKELEKQDL LRRKREDQMR 360 KEMERQDRER RKEEQRILRE QQRLEEKFQR EERREMERRE KFMQKELLRA EKRKQKEERR 420 REKEAARQKA AMERATARRI AKESMELIED ERLELMELAA SSKGLPSILS LDYDTLQNLE 480 SFREALCEFP PKSVQLRMPF AIKPWIDSEE NVGNLLMVWK FCLTFADVLG LWPFTLDEFV 540 QAFHDYDSRL LGEIHVALLK LIVKDIEDVV RTPSGGPGTN QYSAVNPEGG HPHIVEGAYL 600 WGFDIRNWQK HLNPLTWPEI LRQFALSAGF GPQLKKKGVD RVSTSDESKG CEEIVSTLRN 660 GSAAENAVAI MQEKGFPLQR RSRHRLTPGT VKFAAYHVLA LEGSKGLNVI ELAEKIQKSG 720 LRDLTTSKTP EASISVALSR DPILFERIAP STYCVRPAFR KDPADAESII AAAKEKIQRY 780 ANGFLAGQNA DDEERDDDSD SDVPEGTDVD ALAIPLDANK NGECNEVSSC PGDGTDKLTG 840 DAALQNGIGS VDIGEGNADQ GVEIDESQSG ECWVQGLTEG DYSDLSVEER LNALVALIGV 900 ANEGNSIRVI LEERMDAANA LKKQMWAEAQ LDKRRMREEI ITKLYDSSAN AALEGGLSPL 960 VAENKIYDQS TTTLGKDDSS VVAEDIPNSI DNPAQDTSMG QFISPAQQTG HMTERSRLQL 1020 KSYIGHRAEE LYVYRSLPLG QDRRRNRYWQ FVASASCQDP GSGRIFVELS SGHWRLIDSE 1080 EAFDALLTSL DTRGTRESHL HIMLQKIEGC FKECVKRNRL SPNILGHNRK KGGQEAVEGS 1140 SSFANVESPS SAICSTNSDI SEPSLSFRVD IGRNEIEKKN SLKRYEDFQT WMWKECFNSS 1200 IVCAIAYGKK RCLPLLEICN TCHATYDAKK DICPSCHRIP GKVGGKGFFP EQFNGEDIMM 1260 ADSSPLRIRS IKAILALLEA AVPSEALHSS WTEDLRKTWG LELQKSSSIE DLLQILTQFE 1320 GTIKRDFLSA DFETTEELLC YCDSSRVAAT EFSGSVRHLP WIPKTTTAVA LRLLELDASI 1380 FYTPKQKAES HDEKKMEALP KITLRCGNTK GIHKAESMEF DRHGSIKDEN WDNRHETPGS 1440 SGHRQVGRGR GGGRPRRKSR KGVVGSTSQS SKRSMKQGES LAQILLQQGV RTPGEKHVRG 1500 RRTVRKRRME KKIVSDTLQD YVSDKDTYKN VMEEPGSSGR EEMRNFSTIV AENDDSSNSV 1560 EAGDSDDNDN ANENEYHYEK WGATSYDAVS NRGNEMMEMS EEECEEEADE IDDENAYDEE 1620 DSENLEGDME INDDELDREE EGNRDDEGSD SMVSGDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1659 aa Download sequence

MEAGSDGEIN KNMNQSSAEG SKRPKRQMKT PFQLEVLEKT YAMETYPSEA TRAELSQKLD  60
LTDRQLQMWF CHRRLKDKKE AVSMAAMKPR TSGSVGRKGL TDSPREELMT AEPASGHGSG  120
PASASASGSG SGSGSSEFDN GDDTPMVPMR YYDSPRTIME RRVIACVEAQ LGEPLREDGP  180
ILGVEFDELP PGAFGAPIVP AEQQDRYRHS YDSKLYGQYD AKHIKAASNG PHEAVESKTR  240
TDVYGHVAQS SYLYDPPVDG PTPKSLSVMH VNGHLPREHG VEGQPSSMDV YSQHGRQMHF  300
SSPPRNTEFI THNNDNLHME RKRKSDEARI GREVQAHEKR IRKELEKQDL LRRKREDQMR  360
KEMERQDRER RKEEQRILRE QQRLEEKFQR EERREMERRE KFMQKELLRA EKRKQKEERR  420
REKEAARQKA AMERATARRI AKESMELIED ERLELMELAA SSKGLPSILS LDYDTLQNLE  480
SFREALCEFP PKSVQLRMPF AIKPWIDSEE NVGNLLMVWK FCLTFADVLG LWPFTLDEFV  540
QAFHDYDSRL LGEIHVALLK LIVKDIEDVV RTPSGGPGTN QYSAVNPEGG HPHIVEGAYL  600
WGFDIRNWQK HLNPLTWPEI LRQFALSAGF GPQLKKKGVD RVSTSDESKG CEEIVSTLRN  660
GSAAENAVAI MQEKGFPLQR RSRHRLTPGT VKFAAYHVLA LEGSKGLNVI ELAEKIQKSG  720
LRDLTTSKTP EASISVALSR DPILFERIAP STYCVRPAFR KDPADAESII AAAKEKIQRY  780
ANGFLAGQNA DDEERDDDSD SDVPEGTDVD ALAIPLDANK NGECNEVSSC PGDGTDKLTG  840
DAALQNGIGS VDIGEGNADQ GVEIDESQSG ECWVQGLTEG DYSDLSVEER LNALVALIGV  900
ANEGNSIRVI LEERMDAANA LKKQMWAEAQ LDKRRMREEI ITKLYDSSAN AALEGGLSPL  960
VAENKIYDQS TTTLGKDDSS VVAEDIPNSI DNPAQDTSMG QFISPAQQTG HMTERSRLQL  1020
KSYIGHRAEE LYVYRSLPLG QDRRRNRYWQ FVASASCQDP GSGRIFVELS SGHWRLIDSE  1080
EAFDALLTSL DTRGTRESHL HIMLQKIEGC FKECVKRNRL SPNILGHNRK KGGQEAVEGS  1140
SSFANVESPS SAICSTNSDI SEPSLSFRVD IGRNEIEKKN SLKRYEDFQT WMWKECFNSS  1200
IVCAIAYGKK RCLPLLEICN TCHATYDAKK DICPSCHRIP GKVGGKGFFP EQFNGEDIMM  1260
ADSSPLRIRS IKAILALLEA AVPSEALHSS WTEDLRKTWG LELQKSSSIE DLLQILTQFE  1320
GTIKRDFLSA DFETTEELLC YCDSSRVAAT EFSGSVRHLP WIPKTTTAVA LRLLELDASI  1380
FYTPKQKAES HDEKKMEALP KITLRCGNTK GIHKAESMEF DRHGSIKDEN WDNRHETPGS  1440
SGHRQVGRGR GGGRPRRKSR KGVVGSTSQS SKRSMKQGES LAQILLQQGV RTPGEKHVRG  1500
RRTVRKRRME KKIVSDTLQD YVSDKDTYKN VMEEPGSSGR EEMRNFSTIV AENDDSSNSV  1560
EAGDSDDNDN ANENEYHYEK WGATSYDAVS NRGNEMMEMS EEECEEEADE IDDENAYDEE  1620
DSENLEGDME INDDELDREE EGNRDDEGSD SMVSGDYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	80	RRLKDKKE
2	412	421	KRKQKEERRR
3	1454	1458	RPRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein