PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06558.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 225aa    MW: 25145.6 Da    PI: 10.7511
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06558.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-201968255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  PIN06558.1 19 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAARQFRG 68
                58*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MAPRVRAAPV GKRLDNEMHF RGVRKRPWGR YAAEIRDPGK KSRVWLGTFD TAEEAARAYD  60
AAARQFRGPK AKTNFPPPDF DEKKPNDFLN NHSPSQSSTV ESSSRETIPP PKEAAVPDST  120
FLDLTLGSRR MRFPFQKNTR LRSVAVGGGF VRILPVQTTM LHLRPESRQE IIDLMNKMRR  180
VPLEYRGGAA AQSESDSSSV VVDLPKSPIS KGINLDLNLP PPEDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.14e-26ERF family protein