PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06563.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 150aa    MW: 16329.6 Da    PI: 10.0603
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06563.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20858256
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a+++l+g+
  PIN06563.1  8 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSLRGA 58
                69*******.**********883....5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MASTREGHYR GVRKRPWGRY AAEIRDPWKK TRVWLGTFDT PEEAALAYDG AARSLRGAKA  60
KTNFPAPPSG LSLDLNLPSD HRWIAPSGRL MINDFLHTAV LKDVSSQGNG GPVAAAVAAP  120
VDDGDAPGKY FGIVRRGLPI DLNEPPPLWM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.14e-47ERF family protein