PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06593.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 191aa    MW: 22492.3 Da    PI: 10.5923
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF80.21.4e-25959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krie  s rqvtfsk r+ +lKKA+ELSvLCdaeva+iifs +g+lye+ss
  PIN06593.1  9 KRIEKASSRQVTFSKTRKRLLKKAYELSVLCDAEVALIIFSRKGRLYEFSS 59
                79***********************************************96 PP
2K-box61.33.9e-21821691098
       K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                  e+++++ ++++a + ++ie L+++   +lG +L+++s++eLq+  +qL +slk+iRs+K +l++  ie+lq kek+l+een++Lr+k+
  PIN06593.1  82 VEQHMQHVKHKAAMMSRKIEILENS-YGFLGHNLGTCSIEELQSTGEQLGRSLKNIRSRKAQLFKGDIEKLQAKEKSLSEENERLREKV 169
                 5889*******************99.9***********************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MVRGKVEMKR IEKASSRQVT FSKTRKRLLK KAYELSVLCD AEVALIIFSR KGRLYEFSSP  60
NIQRSIQKYL ELTKERHVGM EVEQHMQHVK HKAAMMSRKI EILENSYGFL GHNLGTCSIE  120
ELQSTGEQLG RSLKNIRSRK AQLFKGDIEK LQAKEKSLSE ENERLREKVR FLIISFQKFL  180
TMEWIYIQIR P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-63MIKC_MADS family protein