PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06684.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 240aa    MW: 26979.1 Da    PI: 5.7064
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06684.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.12.5e-3046104259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ +tY+ eHnh+
  PIN06684.1  46 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSKVDPTMLMVTYTCEHNHP 104
                 69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MSRDTKISSA SSSKRSRKAI HKRVVSVPIK DAKKLKGDHQ IGAPPSDSWA WRKYGQKPIK  60
GSPYPRGYYR CSSSKGCPAR KQVERSKVDP TMLMVTYTCE HNHPWPAASR NHRHGIAVAS  120
GGATTASVLE EDSEEEEEEE EEKKPIISNQ SEEVNSEDRF SNFCEFSWFT DFESTNCTLL  180
ESPISAEDRI TTDNEMAMIF TMREEDEPLF ADLGELPECS TVFRRGMVEQ CRLSLATGTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.19e-65WRKY family protein