PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06699.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family LBD
Protein Properties Length: 190aa    MW: 21120 Da    PI: 4.8105
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06699.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.21.4e-3871071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrr+C++dCv+apyf+ eq + +fa+vhk+FGasnv+kll +lp + r da+ ++ yeA ar++dP+yG+v++i++lqqq+++lk+e++ ++
  PIN06699.1   7 SCGACKFLRRRCSSDCVFAPYFCYEQaATHFAAVHKVFGASNVSKLLLHLPLHSRGDAAITVSYEALARMHDPIYGCVAHIFALQQQVASLKEEIEIIG 105
                 6***********************99789******************************************************************9987 PP

      DUF260  99 ee 100
                 ++
  PIN06699.1 106 SQ 107
                 76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MTGLSSSCGA CKFLRRRCSS DCVFAPYFCY EQAATHFAAV HKVFGASNVS KLLLHLPLHS  60
RGDAAITVSY EALARMHDPI YGCVAHIFAL QQQVASLKEE IEIIGSQMAN LGVDVASFMM  120
PFDPYFAIQS EFTNTGISQQ SLLPILPSED ASENQAISSH METEDDITRL LEELNHDYYM  180
QSIWMKNAEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.19e-61LBD family protein