PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06738.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 290aa MW: 31769.2 Da PI: 8.2166

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00086	228	250	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp C+ +Fs+ L+ H + H PIN06738.1 228 VCPQCKLRFSTVGALVDHVEKvH 250 6*****************99888 PP
2	zf-C2H2	18.4	5.9e-06	262	284	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C+k F+++ +L+ H + H PIN06738.1 262 VCPKCSKGFRDPVMLVEHVEReH 284 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MGTPAFPNLG KHCSVEDCRQ IDFLPFTCDC CQQVFCLEHR SYSRHQCPKA NKNDATVVIC 60 PLCAKGVRLI PEEDPNITWE SHVNIECDPS NYEKATKKRK CPVPRCKELL TFSNTIKCRD 120 CNIDHCLKHR FGPDHNCPGP KKPEPAFPFM GFLNKSRKEE PKQAAVSSSS NWASGFLKVA 180 SSVRASAEAG MARLSNEFNA LSTSGGAQSS STSGSTSHSG SASGLIEVCP QCKLRFSTVG 240 ALVDHVEKVH ERNGVMKVTL DVCPKCSKGF RDPVMLVEHV EREHGGVSKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-122	C2H2 family protein