PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06963.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

ARF

Protein Properties

Length: 586aa MW: 64705.6 Da PI: 7.6816

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06963.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.2	1.8e-24	113	214	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ ++d +g++W++++iyr++++r++lt+GW++Fv++++L +gD++vF + +++ l PIN06963.1 113 FAKTLTQSDANNGGGFSVPRYCAETIfprldytAEPPVQ--TILVKDVHGEVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RAENGDL 207 89**************************987555555..8********************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ PIN06963.1 208 CVGIRRA 214 **997 PP
2	Auxin_resp	117.7	9.7e-39	271	354	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a++++ FevvY+Prast+eFvv+++ v++a++v++++GmRfkmafetedss++++ +Gt+++v+ dp++WpnS+Wr+L+ PIN06963.1 271 AANLAASGQLFEVVYYPRASTPEFVVRASAVRDAMRVRWCAGMRFKMAFETEDSSRISWfMGTISSVQVNDPIHWPNSPWRLLQ 354 7899******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MINVMNQVEK SLDPQLWHAC AGGLAQIPPI NSKVYYFPQG HAENGPKNVD FTGFRRISPL 60 ILCRVSYIRY LADDETDEVH AKIGLVPLRG NEFDDVGDVG FMGFEEKEKP NSFAKTLTQS 120 DANNGGGFSV PRYCAETIFP RLDYTAEPPV QTILVKDVHG EVWKFRHIYR GTPRRHLLTT 180 GWSNFVNQKK LVAGDSIVFL RAENGDLCVG IRRAKMGIGG GPEVSFGWSV NHAYSSGNGN 240 MFIGNVGKGN GNCGLGAKER GNVTAELVTE AANLAASGQL FEVVYYPRAS TPEFVVRASA 300 VRDAMRVRWC AGMRFKMAFE TEDSSRISWF MGTISSVQVN DPIHWPNSPW RLLQVAWDEP 360 ELLQNVKRVN PWLVELVSNV PTIHLSPFST PRKRPRLPEP SEFSGGQLPM MTTLLTNPLS 420 PSSPLCCFSD NISARIQGAR HAQIALSSSD LHFNKLQMGL RPFDFKAGPL NLSCSNQSLK 480 KNTEKKAPVF LLFGQPILTE QQISLSCSID TGRETLSEGN KENIGNVSNQ SVSSVIQNCP 540 PDASLDKEFP KTAHCKVFVE SDIVGRSLDL TMLSSYEELN GKVTAM

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MINVMNQVEK SLDPQLWHAC AGGLAQIPPI NSKVYYFPQG HAENGPKNVD FTGFRRISPL  60
ILCRVSYIRY LADDETDEVH AKIGLVPLRG NEFDDVGDVG FMGFEEKEKP NSFAKTLTQS  120
DANNGGGFSV PRYCAETIFP RLDYTAEPPV QTILVKDVHG EVWKFRHIYR GTPRRHLLTT  180
GWSNFVNQKK LVAGDSIVFL RAENGDLCVG IRRAKMGIGG GPEVSFGWSV NHAYSSGNGN  240
MFIGNVGKGN GNCGLGAKER GNVTAELVTE AANLAASGQL FEVVYYPRAS TPEFVVRASA  300
VRDAMRVRWC AGMRFKMAFE TEDSSRISWF MGTISSVQVN DPIHWPNSPW RLLQVAWDEP  360
ELLQNVKRVN PWLVELVSNV PTIHLSPFST PRKRPRLPEP SEFSGGQLPM MTTLLTNPLS  420
PSSPLCCFSD NISARIQGAR HAQIALSSSD LHFNKLQMGL RPFDFKAGPL NLSCSNQSLK  480
KNTEKKAPVF LLFGQPILTE QQISLSCSID TGRETLSEGN KENIGNVSNQ SVSSVIQNCP  540
PDASLDKEFP KTAHCKVFVE SDIVGRSLDL TMLSSYEELN GKVTAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein