PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06966.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 371aa MW: 42690.7 Da PI: 4.7628

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06966.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.4	1.3e-34	57	148	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++++++d + + +sw++ g+sfvv+d++ f+++vLpkyFkh+nf+SFvRQLn+YgF+k++ ++ weF+++sF +g+k+ll++i+ PIN06966.1 57 FLTKTFDMVDDLSSDYNVSWNRGGHSFVVWDPHAFSTSVLPKYFKHNNFSSFVRQLNTYGFRKIEPDK---------WEFANESFLRGQKHLLKNIR 144 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PIN06966.1 145 RRKA 148 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MEPMFSIKKE YPGGPSSSSS YQPPHGVEPP PSAEEYGVVQ PPPRPMEGLH DMGPPPFLTK 60 TFDMVDDLSS DYNVSWNRGG HSFVVWDPHA FSTSVLPKYF KHNNFSSFVR QLNTYGFRKI 120 EPDKWEFANE SFLRGQKHLL KNIRRRKATP HQIQPPQQAV GPLVEVGRFG LDAEIDSLRR 180 DKNVLMMELV KLRHQQQTTR AYLQQMELRL QGTEKKQQQM MSFLARAMQN PEFIHQLVQQ 240 KEKRKELEEV ISKKRRRPIE GGESSRANPV KSEPLDFGDR GYGFEVSELE ALALEMQGFG 300 RAKREEEEEE EEEEEEELEQ LGSYDKELDE GFWEELLNEG FDKEGGDDEE GEEADVNVLA 360 NRLGFLGSSP K

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MEPMFSIKKE YPGGPSSSSS YQPPHGVEPP PSAEEYGVVQ PPPRPMEGLH DMGPPPFLTK  60
TFDMVDDLSS DYNVSWNRGG HSFVVWDPHA FSTSVLPKYF KHNNFSSFVR QLNTYGFRKI  120
EPDKWEFANE SFLRGQKHLL KNIRRRKATP HQIQPPQQAV GPLVEVGRFG LDAEIDSLRR  180
DKNVLMMELV KLRHQQQTTR AYLQQMELRL QGTEKKQQQM MSFLARAMQN PEFIHQLVQQ  240
KEKRKELEEV ISKKRRRPIE GGESSRANPV KSEPLDFGDR GYGFEVSELE ALALEMQGFG  300
RAKREEEEEE EEEEEEELEQ LGSYDKELDE GFWEELLNEG FDKEGGDDEE GEEADVNVLA  360
NRLGFLGSSP K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	243	257	KRKELEEVISKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-116	HSF family protein