PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06981.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 285aa MW: 30854.5 Da PI: 7.2626

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00064	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H PIN06981.1 105 YECKTCNRTFPSFQALGGHRASH 127 99**********99999998887 PP
2	zf-C2H2	12	0.00062	190	212	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H PIN06981.1 190 HECSICGSEFASGQALGGHMRRH 212 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MMKMEILEDF SASNDQIIVK GKRTKRPRPS SSTSSSGGAG EFVTSPTTSS GISTSTEEDE 60 DMANCLILLA QGSSPPQAAG ESKFCSRKFT EMATTTNGKV GIYVYECKTC NRTFPSFQAL 120 GGHRASHKKP KPTTDNDQKK LPPPLPQTPA ALPHDEVKEE EEEKVAQVTT PATQLQNKSC 180 QNDQNKAKIH ECSICGSEFA SGQALGGHMR RHRPAAPSTT KIGANTDNDS STTSHDVGEK 240 KPRNMLALDL NLPAPPEDDK FHQFPAAKQQ LHLVFYAAAL VDCHN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	25	29	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	4e-50	C2H2 family protein