PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06994.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 161aa    MW: 18939.8 Da    PI: 10.018
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.64.8e-1814104498
                 E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  l+  d ++s+ l++p +f+++++ k ++++tl+  d++g  +sW+v++  ++ + ++++t+GW++F+++ +Lk ++f++Fk++g+s f  +v+v++
  PIN06994.1  14 FLM-DDDFTSK-LRIPTQFMKNYEDKLPSNITLRTHDLWGksKSWRVQI--EQVKHHHFFTEGWSKFAQDVDLKLREFLLFKFVGSSAF--HVSVYD 104
                 442.3444444.***********88888999******999999******..999999***************************99999..888765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MVRDSKTGSS FYKFLMDDDF TSKLRIPTQF MKNYEDKLPS NITLRTHDLW GKSKSWRVQI  60
EQVKHHHFFT EGWSKFAQDV DLKLREFLLF KFVGSSAFHV SVYDIAGCKK EFSYSGDQER  120
KTSAVKRWEF SKELKMYHFA DCRLSIPKCF AKGTGLHSVV K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.17e-14B3 family protein