PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07011.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 419aa    MW: 47244.8 Da    PI: 6.7542
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS402.34.8e-123524191374
        GRAS   1 lvelLlecAeav.ssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                 +++lL++cAe + s +dl++a++l++ ls+++sp+gd+++Rl++ ft+ALa rl  ++    + +++ +  ++  +   +++  +++v+P+++fshlt 
  PIN07011.1  52 MRQLLITCAELIiSRSDLSAAHRLISILSTNSSPYGDSTERLVHQFTKALALRLDPHTAA-TSNITVDDFGSNGKALIQSSYLSLNQVTPFIRFSHLTS 149
                 589*******862669***************************************94444.44566666665555566666677*************** PP

        GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl..vakrledleleeLr 195
                 NqaIlea++g++++Hi Dfdi++G+QWp+L+qa a+   +ppslRiT+ g     + e+l++tg+rL+kfA++lg++f+f+++  + ++     +++L 
  PIN07011.1 150 NQAILEAIQGQQAIHIFDFDIKHGVQWPPLMQAVADH-CPPPSLRITATGT----DLETLQQTGDRLSKFAHSLGLRFQFHPIilHINEDPISITSSLV 243
                 ***********************************95.899**********....***************************943333333345789** PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 + p+E+l++n+v+ lhrll++s  l      +L+ +k ++P+v++v+e+ea+hn++ F +rf+eal++y+a+fdslea+lp++s er+ +E+ ++g+ei
  PIN07011.1 244 LLPEETLVINCVHYLHRLLKDSDRLCL----FLHHIKAMNPRVLTVAEREANHNHPIFRQRFVEALDHYTAVFDSLEATLPPTSAERMALEQIWFGEEI 338
                 *******************88777777....******************************************************************** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +n+va+eg++r+e he+ ++W+++l++aGF+++pls +a++qaklllr ++ s+gy++   ++sl+lgW+++pL+svS+W+
  PIN07011.1 339 MNIVAAEGENRIETHERIRSWKMMLRNAGFSNIPLSRFAVSQAKLLLRLHYpSEGYQLGILDDSLFLGWQNQPLFSVSSWQ 419
                 ********************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MLGSFGSSSH MVTSATATEE EAPPPPNTYL HPHHHYHHQI HPWNSAPPPA HMRQLLITCA  60
ELIISRSDLS AAHRLISILS TNSSPYGDST ERLVHQFTKA LALRLDPHTA ATSNITVDDF  120
GSNGKALIQS SYLSLNQVTP FIRFSHLTSN QAILEAIQGQ QAIHIFDFDI KHGVQWPPLM  180
QAVADHCPPP SLRITATGTD LETLQQTGDR LSKFAHSLGL RFQFHPIILH INEDPISITS  240
SLVLLPEETL VINCVHYLHR LLKDSDRLCL FLHHIKAMNP RVLTVAEREA NHNHPIFRQR  300
FVEALDHYTA VFDSLEATLP PTSAERMALE QIWFGEEIMN IVAAEGENRI ETHERIRSWK  360
MMLRNAGFSN IPLSRFAVSQ AKLLLRLHYP SEGYQLGILD DSLFLGWQNQ PLFSVSSWQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-125GRAS family protein