PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07024.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 863aa MW: 98132.4 Da PI: 6.5374

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72	1.3e-22	185	272	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Yn+YA + GFs+rk+ ++sk +g +++r+++C ++g+ +++++ + +++r+etrtgC a+++++++++gk++v+++e+ HnHe++ PIN07024.1 185 KCYNRYALMEGFSIRKDFVNRSKVTGLVVSRRYTCHRQGYGSTKHNV--NMNKPRKETRTGCLAHMTITRQTNGKYRVIHFETRHNHEFV 272 58*************************************998766..999**********************************97 PP
2	FAR1	89.8	3.8e-28	320	409	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +vGFsvrk++ ++sk +g + +r+++C +eg+r+++k+ +k +r+r+etr+gC a+l+++++ dg+++vt++e+ HnHel+p PIN07024.1 320 EFYNAYAGQVGFSVRKDYVNRSKIDGAVASRRYTCFREGYRQKDKRG-SKVKRPRKETRVGCMAQLVISRQADGRYRVTHFEERHNHELVP 409 6*****************************************999.99*************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 863 aa Download sequence
MDSGLAAGVS NSIGDGNGEK RDPPSRANAE VAFVHEDASL SQEASSADKD GMDIDSESTY 60 SCLNSSSDSD KKSVNSDGEH EFTSQNGSSI DHNGLNKYAE HERRSPRTCD NSNNGLDIEG 120 KKDNHSPGVS SDNQLEVDAD DKHVSTSEGP SSASSGSVQV VKDEAGEYIV PKLGVEFESE 180 DHAYKCYNRY ALMEGFSIRK DFVNRSKVTG LVVSRRYTCH RQGYGSTKHN VNMNKPRKET 240 RTGCLAHMTI TRQTNGKYRV IHFETRHNHE FVTPFTAHLL PSQKRISFVE AVEAESATAP 300 VPDGVPKLGM GFDTENHAYE FYNAYAGQVG FSVRKDYVNR SKIDGAVASR RYTCFREGYR 360 QKDKRGSKVK RPRKETRVGC MAQLVISRQA DGRYRVTHFE ERHNHELVPA CKVRMLRSQK 420 RSVTNQIVES SASGSSDALP KSGTELLLTG IGVQDDFMYD PIDHEMSLTS KRVLGIKQEE 480 VESIHQYFQR KKLKDPSFVY AVQLDVEEEM TNFFWAEEKM LVDYGDFGDV VCFDTTCCLN 540 KEWKPLVLFF GINNHKQLLV FGAAFLYDDT VQSFKWLFRT FIKAMSGKTP KTILSDRFAV 600 ISEAIISELP KTYHKLCTWQ MYQDALKHLN QVVISDSFSN DLCGCIFNPD EEDFIDSWKV 660 MLDTYGLWEN EWLHGIFVER EKWALPYSKH MFSADIETAL LSEDSITSLK KYLKPESCVL 720 QFVKHFGRVV NEWRYKELEA NYDMGQHMPG LMGDVILLKQ AREVYTPIIF KMFHQEYEDC 780 LNIVINQCID TASLVEYKVS TYGQVRQYTV LYSSEDDSVT CSCMKFQSVG ILCSHAVKVL 840 DYRNIKIVPS QYILKRWTRE ARA

Sequence ? help Back to Top

Protein Sequence Length: 863 aa Download sequence

MDSGLAAGVS NSIGDGNGEK RDPPSRANAE VAFVHEDASL SQEASSADKD GMDIDSESTY  60
SCLNSSSDSD KKSVNSDGEH EFTSQNGSSI DHNGLNKYAE HERRSPRTCD NSNNGLDIEG  120
KKDNHSPGVS SDNQLEVDAD DKHVSTSEGP SSASSGSVQV VKDEAGEYIV PKLGVEFESE  180
DHAYKCYNRY ALMEGFSIRK DFVNRSKVTG LVVSRRYTCH RQGYGSTKHN VNMNKPRKET  240
RTGCLAHMTI TRQTNGKYRV IHFETRHNHE FVTPFTAHLL PSQKRISFVE AVEAESATAP  300
VPDGVPKLGM GFDTENHAYE FYNAYAGQVG FSVRKDYVNR SKIDGAVASR RYTCFREGYR  360
QKDKRGSKVK RPRKETRVGC MAQLVISRQA DGRYRVTHFE ERHNHELVPA CKVRMLRSQK  420
RSVTNQIVES SASGSSDALP KSGTELLLTG IGVQDDFMYD PIDHEMSLTS KRVLGIKQEE  480
VESIHQYFQR KKLKDPSFVY AVQLDVEEEM TNFFWAEEKM LVDYGDFGDV VCFDTTCCLN  540
KEWKPLVLFF GINNHKQLLV FGAAFLYDDT VQSFKWLFRT FIKAMSGKTP KTILSDRFAV  600
ISEAIISELP KTYHKLCTWQ MYQDALKHLN QVVISDSFSN DLCGCIFNPD EEDFIDSWKV  660
MLDTYGLWEN EWLHGIFVER EKWALPYSKH MFSADIETAL LSEDSITSLK KYLKPESCVL  720
QFVKHFGRVV NEWRYKELEA NYDMGQHMPG LMGDVILLKQ AREVYTPIIF KMFHQEYEDC  780
LNIVINQCID TASLVEYKVS TYGQVRQYTV LYSSEDDSVT CSCMKFQSVG ILCSHAVKVL  840
DYRNIKIVPS QYILKRWTRE ARA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-99	FAR1 family protein