PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07028.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 191aa    MW: 22319.2 Da    PI: 5.135
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07028.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.23.4e-121457146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     rg+WT eEd +l   +   G  +W+ +++  g  Rt++++k++w++
       PIN07028.1 14 RGPWTIEEDHKLMSFIMNNGIQCWRMVPKLAG--RTDNEIKNHWNT 57
                     89*****************************8..**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MGRQPCCDKI GLKRGPWTIE EDHKLMSFIM NNGIQCWRMV PKLAGRTDNE IKNHWNTRIK  60
KRLKLSGLDP LTHQPIVQKE KAKSDFKQNE EEKVEINAQI LQEEPKADHQ IMNEAKADII  120
TRSSDNLINY EMMYRSTYSP SIISLEDSVS FHNSMGESIY EESSNMQQWV ESVDSFLYWD  180
GINEVDQNFV F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.17e-39MYB family protein