PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07082.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 212aa    MW: 23449.7 Da    PI: 7.7235
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07082.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.72.1e-20114148135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++
  PIN07082.1 114 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 148
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MMQRCSSNDD SYNSMFFSMP NGGQYTGYDE EEMYPAYTTS SPPSSSVDCT LSLGTPSTRL  60
TNEKEKKRSS CTSSFGWNIM PSKNAQPSSA GKSHRSGSNG NAASGGDPLL ARRCANCDTT  120
STPLWRNGPR GPKSLCNACG IRYKKEERRA TAAAAAASSG ADDTQQMMDN SWVQSQRMGY  180
YSPAYANEYR FMEEDDSYHT WRFNVPVHDF TR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.18e-41GATA family protein