PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07165.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 276aa MW: 30979.7 Da PI: 7.4333

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.2	0.0012	2	23	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++C+k s+ L H+++H PIN07165.1 2 ECQICSKKLSSAKALGGHMKSH 23 7*******************99 PP
2	zf-C2H2	16	3.4e-05	168	190	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k F+++ L +H +H PIN07165.1 168 YTCETCKKIFKSPQGLGNHKASH 190 9******************9998 PP
3	zf-C2H2	17.3	1.3e-05	218	240	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C++ F++ L H r+H PIN07165.1 218 YKCSFCDQIFNSAQALAEHKRSH 240 9********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MECQICSKKL SSAKALGGHM KSHYAFFPLP PKATQVEKHN EPVNGSTSSL ISSNEKGGSS 60 GDKSLSCATY GLRENPKKSL RLVDTHFDNE GSLVETKKSE PRLATQGRCK RVSVENGQEG 120 ITKECLQESN LEKQSGFESV EDVAWCLVML SRDVWISPDS EIMHRKDYTC ETCKKIFKSP 180 QGLGNHKASH DRKAKNSVDD VCEDNVRKQK NFVEEQVYKC SFCDQIFNSA QALAEHKRSH 240 FSKVGESSTS INISDNSREF YIDLNMPPRT EDEEKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	1e-25	C2H2 family protein