PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07225.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 809aa MW: 92626.5 Da PI: 8.4905

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07225.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.8	8.5e-24	73	159	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYA+ vGF +++++s++sk++g++++ + Cs+ g++++++++ ++r+ +t+Cka+l++kk+ +gkw ++++++eHnHe++p PIN07225.1 73 SFYREYARLVGFGITIKASRRSKKSGKFIEIKIACSRFGRKRQSSTT----ISPRSCPKTDCKASLHIKKQPEGKWFIYNFVEEHNHEMCP 159 5*************************************9998877....99**********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
MDTELELPSG KKGRLDAALD KNKNYTEGIV VDSGIVGDGD GVDLSTFKDN KSGINSYMPK 60 KGMEFETKEA AYSFYREYAR LVGFGITIKA SRRSKKSGKF IEIKIACSRF GRKRQSSTTI 120 SPRSCPKTDC KASLHIKKQP EGKWFIYNFV EEHNHEMCPD DFYNAIRGRK NQNTDAVCQK 180 KGLQLVLDER DVQLLLDYFM DMQAEAPGFY HVIDFDKEAR MRNVFWVDPK GRHDYVSFSD 240 VVFFDTHYVR NKCNITFVPV IGVNHHFQFI LLGCALIGDD TKSTFVWLMR TWLRAVSGRH 300 PKVVITDNDK SLEEATVEVF PDAFHCFCPW HVFREVGPRL SHKLSNFEVF LMKFRKCCTC 360 RSWTNEEFEK KWQKMVNKFN LVDDVWIQSL YDDRRKWIPA YMRNVFLGGF CTVERLQSIA 420 SFFDKYLQKE TTMKGFIDQY KLFLHESCEE EGKAEIETKH AQVTLISHSP FEKQMSRLYT 480 NAIYKNFQAE VSGMGACTVG KEGEDVRTTT FKVDELEMKQ SFTVSWDKGK YDICCSCHLF 540 EYSGYLCRHA LSVLQLSGIS TIPSNYILKR WTRKAKIRDT APRASTNMNF RVQRLNDLCK 600 LAIRLGEEGS LSGEAYHVAC HALEEALKHC VAMNNSMKSI VEANRTTAPC LSDIGHKEGT 660 SVVKSSKTKK VPKKRKVRAE AETLSIGTRD SSQHVFNQRS FGHNDSYFSQ HDLVGMDVGL 720 RIPTINGYYG AQQRHLNSFS SLHDCYYSDP PIMQGALGNL NAVSAHVSHN MTEQSLQRLL 780 QGQFTFRASS PEGGFQETTV NMTSQYLHD

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

MDTELELPSG KKGRLDAALD KNKNYTEGIV VDSGIVGDGD GVDLSTFKDN KSGINSYMPK  60
KGMEFETKEA AYSFYREYAR LVGFGITIKA SRRSKKSGKF IEIKIACSRF GRKRQSSTTI  120
SPRSCPKTDC KASLHIKKQP EGKWFIYNFV EEHNHEMCPD DFYNAIRGRK NQNTDAVCQK  180
KGLQLVLDER DVQLLLDYFM DMQAEAPGFY HVIDFDKEAR MRNVFWVDPK GRHDYVSFSD  240
VVFFDTHYVR NKCNITFVPV IGVNHHFQFI LLGCALIGDD TKSTFVWLMR TWLRAVSGRH  300
PKVVITDNDK SLEEATVEVF PDAFHCFCPW HVFREVGPRL SHKLSNFEVF LMKFRKCCTC  360
RSWTNEEFEK KWQKMVNKFN LVDDVWIQSL YDDRRKWIPA YMRNVFLGGF CTVERLQSIA  420
SFFDKYLQKE TTMKGFIDQY KLFLHESCEE EGKAEIETKH AQVTLISHSP FEKQMSRLYT  480
NAIYKNFQAE VSGMGACTVG KEGEDVRTTT FKVDELEMKQ SFTVSWDKGK YDICCSCHLF  540
EYSGYLCRHA LSVLQLSGIS TIPSNYILKR WTRKAKIRDT APRASTNMNF RVQRLNDLCK  600
LAIRLGEEGS LSGEAYHVAC HALEEALKHC VAMNNSMKSI VEANRTTAPC LSDIGHKEGT  660
SVVKSSKTKK VPKKRKVRAE AETLSIGTRD SSQHVFNQRS FGHNDSYFSQ HDLVGMDVGL  720
RIPTINGYYG AQQRHLNSFS SLHDCYYSDP PIMQGALGNL NAVSAHVSHN MTEQSLQRLL  780
QGQFTFRASS PEGGFQETTV NMTSQYLHD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	670	676	KVPKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.3	0.0	FAR1 family protein