PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07226.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 249aa    MW: 27213.4 Da    PI: 9.3394
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.24.6e-14107151347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
       PIN07226.1 107 PWTEEEHRLFLIGLTKLGKGDWRGISRNFVTTRTPTQVASHAQKY 151
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MKMGRKCSHC GNIGHNSRTC NKGHINGGGV RLFGVQLDIT SSSSSIPSIQ KSFSLDCLSS  60
TPTLSSSSSS PTSSLTSINE RPQHQTSFGY LSDGPLDRPP DRKKGVPWTE EEHRLFLIGL  120
TKLGKGDWRG ISRNFVTTRT PTQVASHAQK YFLRQASINK KKRRSSLFDM VGGSDNTCPE  180
TQFHVDKKSN EQECGEIFSM ASSQRNDLIW GYENSNAGPE LELTLSGPRT VGQQESSPTS  240
VLMGPISVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160164KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.15e-52MYB_related family protein