PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07305.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

YABBY

Protein Properties

Length: 186aa MW: 20912.9 Da PI: 8.5015

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	212.1	1.9e-65	2	158	2	170
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas.qllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 +++ sse+vCyv+CnfCntil+v+vP + ++++vtvrCGhC++llsvn+ q l ++hl+ ++ +++ ++ + + s+s+s++ PIN07305.1 2 SMDMSSERVCYVHCNFCNTILVVNVPCSNMLNIVTVRCGHCSNLLSVNMGALLhQSLQFQDHLQ--------LQR--QQSMADVAIKDSGSSSRSNRFG 90 67899****************************************99877614455555533........222..2222223333333333333333 PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++ e pr+ p + PPekrqrvPsaynrfikeeiqrika+nP+i+hreafs+aaknWah+P+ih gl PIN07305.1 91 --LLQHEYEQPRMTP-VCPPEKRQRVPSAYNRFIKEEIQRIKANNPEITHREAFSTAAKNWAHLPHIHLGL 158 ..3566778899999.78************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MSMDMSSERV CYVHCNFCNT ILVVNVPCSN MLNIVTVRCG HCSNLLSVNM GALLHQSLQF 60 QDHLQLQRQQ SMADVAIKDS GSSSRSNRFG LLQHEYEQPR MTPVCPPEKR QRVPSAYNRF 120 IKEEIQRIKA NNPEITHREA FSTAAKNWAH LPHIHLGLKL EGNTQAKMDN AVAGGSDKGT 180 QTLGFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	7e-75	YABBY family protein