PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07335.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YA
Protein Properties Length: 208aa    MW: 23213.9 Da    PI: 9.1909
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.32.2e-32113169158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep++VNaKQy++Il+RRq+Rak+e+e+kl ++srkpylheSRh hAlrR+Rg+gGrF
  PIN07335.1 113 EEPVFVNAKQYHGILRRRQSRAKAESENKL-SRSRKPYLHESRHLHALRRARGNGGRF 169
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MTSSVHSLSD NSEANEQQKH ADSLVQPSSP ANAMSHPGVA SPTMQYAAPA HLGVGNVMAQ  60
TTYPYPDPYY RSIFAPYDTQ PYPAQPYPPQ QMVHLQLMGI QQAGVPLPSE AVEEPVFVNA  120
KQYHGILRRR QSRAKAESEN KLSRSRKPYL HESRHLHALR RARGNGGRFQ KKSENQIKED  180
ESSEKSLDNI NLQCEKDGRK KVPPDDAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.23e-64NF-YA family protein