PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07387.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 178aa    MW: 20058.5 Da    PI: 4.7445
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07387.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.5e-096302046
                     TTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqk 46
                     G++ W+ Ia+ ++ gRt++++k++w++
       PIN07387.1  6 GSR-WSIIAAQLP-GRTDNDIKNYWNT 30
                     778.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MYITIGSRWS IIAAQLPGRT DNDIKNYWNT RLKKKLLGKH RREQQAGKQF VTKKGCESLY  60
PPPPQTVAAP PLLVKDQLHD SNSVDDVLLM PQLEAKFCYD DQNFESFQYF SDFSCPESHE  120
QVGINFPGFD DILMYSVPPQ LDGVQSFSPV DMVNGSTVSS VSQDNSSWGD ISSLVYQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.12e-17MYB family protein