PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07394.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family SBP
Protein Properties Length: 133aa    MW: 15334.1 Da    PI: 8.1406
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP138.91.4e-4353129177
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                 +Cqve+C+ad++ ak yhrrhkvCe h+ka+vvl++g++qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk++
  PIN07394.1  53 TCQVEDCTADMTGAKPYHRRHKVCEYHAKAAVVLLAGMQQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSS 129
                 6**************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
METNREGKMI MEAPEFDEEG EEDEDVGEDS KKRRALTPPK RRVSGAGGST QRTCQVEDCT  60
ADMTGAKPYH RRHKVCEYHA KAAVVLLAGM QQRFCQQCSR FHELSEFDEA KRSCRRRLAG  120
HNERRRKSSY DSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.11e-43SBP family protein