PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07416.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 247aa    MW: 27541 Da    PI: 5.2838
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.3e-20122172255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp+++g   r++lg+f+ta  Aaka+++a+ k++g
  PIN07416.1 122 HYRGVRRRP-WGKYAAEIRDPTSRG--SRVWLGTFDTAVAAAKAYDKAAFKMRG 172
                 8********.***********8876..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MANPAEVSAV ERIRIHLLGE FSTGELDNDA STSGTLASSV ASSEFDSLYS QLSTCDSGLS  60
IPDNSLGLQQ NQVNNSLIID LTTPKAKPSL RIEVPEAGRQ FELIKFECNA AGEEEEDKEK  120
KHYRGVRRRP WGKYAAEIRD PTSRGSRVWL GTFDTAVAAA KAYDKAAFKM RGSKAILNFP  180
LEIQLQERGA SDVERKRRRE VEEGEIVEFG QLKMGKREAA VKSEITEWEP LTPSFWQLSR  240
YLPILSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195199RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17490.11e-26ERF family protein