PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07542.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 269aa    MW: 29939.4 Da    PI: 5.1365
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-193785355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a+++++g
  PIN07542.1 37 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAALAYDRAARSMRG 85
                67******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDSTNRSSSS SPSPSKTKRK GNNSQQQNQQ ESSTNRFLGV RRRPWGRYAA EIRDPTTKER  60
HWLGTFDTAE EAALAYDRAA RSMRGSRART NFVYSDMPPG SSVTSIISPD ETRNDFSMLF  120
PDSHHSDHNQ ADQQLFFFGQ SELNTGPFQL TGDHAWNQTH NTNANNISTL YEQPGSCSEF  180
QYRLATADAA HELPPLPPDI TSSGGYLEEP PVLSEMGHGV LNDMRYLELS EQRRSMDAAV  240
PYDAGDAYLG FSDSTDGARN SFSGGFGWF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.12e-29ERF family protein