PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07543.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 268aa    MW: 29634.4 Da    PI: 4.7035
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-193785355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + GVr+++ +gr++AeIrdp++   ++r++lg+f+taeeAa a+++a+++++g
  PIN07543.1 37 FLGVRRRP-WGRYAAEIRDPTT---KQRHWLGTFDTAEEAALAYDRAARSMRG 85
                67******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MDSINRSSSS SPSPSKTKRR GNNNQQQNQQ ESSTNRFLGV RRRPWGRYAA EIRDPTTKQR  60
HWLGTFDTAE EAALAYDRAA RSMRGSRART NFVYSDMPPG SAVTSIISPD ETCNDFSMLF  120
ADSQRSDLNS TGQQLFSMGP SQLNTSPFQL TGDLAWHQTY NTNANSISTL YEQQGSCSEF  180
QFRLPLGDAT DELPPLPPDI TSSCGYLAEP PVLSEMGHGV LNDMRYLELS EQRPSMDAAV  240
PYDGGDAYLG FGDSIDGARN SFSGFGWF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.14e-28ERF family protein