PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07623.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 261aa MW: 29889.3 Da PI: 9.3363

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	96	7.1e-30	55	155	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............. 88 g+kdrhsk++T +g+RdRR+Rls+++a++++dLq++LG+ ++sk ++WL+++ k +i++l+ +++ ++ + +++ssss ++++++ PIN07623.1 55 GGKDRHSKVCTVKGLRDRRIRLSVPTAIQLYDLQERLGLSQPSKVVDWLIEATKNEIDKLPPLPNFPQFHPQESSSSSLPDFPNNQdlgikmneqnffp 153 68*************************************************************777774545555555555555445554444333333 PP TCP 89 .k 89 + PIN07623.1 154 lN 155 31 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MNPRQEQDYR QAKKEGVDDA NHYKFPKNNI ITSSSSRQFS SFKNPRIVRV SRTCGGKDRH 60 SKVCTVKGLR DRRIRLSVPT AIQLYDLQER LGLSQPSKVV DWLIEATKNE IDKLPPLPNF 120 PQFHPQESSS SSLPDFPNNQ DLGIKMNEQN FFPLNHQSSS IPNMPYNSNN YLINWDHSHH 180 PNLSLSQFGG GYNSFSFSSQ TDVFPASMPS FFPPFSSQIM ENINENFQQN SILPTTLHLK 240 SFTLDEISSK NVHSLDKDKR N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08070.1	3e-43	TCP family protein