PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07666.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 254aa    MW: 28680.3 Da    PI: 4.6032
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.45.1e-135395754
                HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                  Er+RR+++N+++  Lr+++P+      +K++Ka++ + A+eYI+sL
  PIN07666.1 53 VSERNRRKKLNERLYALRSVVPNI-----TKMDKASTIKDAIEYIQSL 95
                57*********************7.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDNIDDEYKN YWETNMFFQS EELDSYFDDP ISAYYDSSSP DGTQSSLASK NIVSERNRRK  60
KLNERLYALR SVVPNITKMD KASTIKDAIE YIQSLHDEER RIQAEISELE SAAAGTGSLS  120
KSSSTIFEFE HQDSATFSSK PKRTRLINDH CYDSPASRLM PSPIELLELR VSNMGEKTIV  180
VSLTCSKRTD TMVKLCEIFE SLKLKIITAN ITAFSGTLLK TVFVEADEEE KEVLRLKIEA  240
AIAALNDPDS PMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.14e-91bHLH family protein