PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08005.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 308aa    MW: 35594.8 Da    PI: 4.8634
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.45.1e-13301011590
                 -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                    +p+ f ++++++      ++l+d+  + W++++   + ++  ++ +GW +F ++n L+ g f+vF++ +r+ f
  PIN08005.1  30 VKKIPRAFGSQMQEV--LANSVILRDRCENMWQMEV--ARAGDDWYFDEGWAKFYEENSLEPGNFLVFEYRDRNLF 101
                 5679*****988866..6667***************..99999999***********************9876555 PP
2B346.37.5e-15208290690
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
          B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                 t+s +++++ l +pkk + ++ ++   +k l l de+gr+W+ k++ ++  gr + t+GWk+ ++ n+++  D+++ +++++ +++
  PIN08005.1 208 TRSRTSRKNELHIPKKVIVDYHLE--IPKNLFLIDEKGRKWKTKIKEWRD-GRLWCTRGWKSLCNINNIDKDDVCICEFVQEeDSE 290
                 5678889999***********887..7778***************77776.589************************88653333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MLGYVASSRV TTGCSSMAII SGHVRVSHKV KKIPRAFGSQ MQEVLANSVI LRDRCENMWQ  60
MEVARAGDDW YFDEGWAKFY EENSLEPGNF LVFEYRDRNL FDFKLLGSDG CEKKGVGVLK  120
FSFNEEHNGD GYDNDNDSDD DDDKDDDDES KEEQDEEEEQ INTSNTFGSG IIPSKRRYRK  180
RNICCDCYGA DIFESGLVPR PKHPYFVTRS RTSRKNELHI PKKVIVDYHL EIPKNLFLID  240
EKGRKWKTKI KEWRDGRLWC TRGWKSLCNI NNIDKDDVCI CEFVQEEDSE DVQIVVHVLD  300
IAGKQGLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-16B3 family protein