PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08093.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WOX
Protein Properties Length: 257aa    MW: 28190.2 Da    PI: 6.4005
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox48.81.2e-152484257
                T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                r+R+t+++eq+ +Le+ F++   +p ++e  ++ k l    ++ +++V++WFqNrR + ++
  PIN08093.1 24 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 84
                89*****************99*************************************997 PP
2Wus_type_Homeobox107.48.6e-352386265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q
         PIN08093.1 23 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 86
                       589***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MEDHEQERQP SHGSEADQRS EPVRSRWTPK PEQILILESI FNSGMVNPPK DETVRIRKLL  60
EKFGSVGDAN VFYWFQNRRS RSRRRQRQIQ ASLSAAGGEQ TQAPPRGGGA IQHENAISSG  120
GFAPNINSLS YPMNSNSCFL GSGPSSSSSS SFGLGTNDAT PDEFFSFSGH PAGFRELEQN  180
SFFGPPVTPY PPGTITVFIN GVATEVGRGP LDMKAMFGEG DFVLFHSSGV PVQVNEYGFL  240
MQSLQHGESY FLVPRHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17810.17e-58WOX family protein