PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08096.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family CO-like
Protein Properties Length: 336aa    MW: 36662.8 Da    PI: 5.1199
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box20.97.3e-071556439
    zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                r+C+++ +     +C+ +  +lC +C   +H +      H++
  PIN08096.1 15 RTCDTCRSAASAVYCRADLAYLCTSCDARIHASnqlasrHER 56
                79******99*********************76777777876 PP
2zf-B_box30.67.1e-1057100340
    zf-B_box   3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 
                  ++C+ +e+ ++ + C+ ++  lC++C  e+H+       H ++
  PIN08096.1  57 VWVCESCERAPAAFLCKADSASLCATCDAEIHSAnplarrHHRI 100
                 689*****************************668888886555 PP
3CCT70.15.6e-24267310144
         CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                 Rea++lRY+eK+k+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++
  PIN08096.1 267 REARVLRYREKKKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 310
                 9*****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MLKLESTTVN GGGARTCDTC RSAASAVYCR ADLAYLCTSC DARIHASNQL ASRHERVWVC  60
ESCERAPAAF LCKADSASLC ATCDAEIHSA NPLARRHHRI PVPPIPGTLY GPSAAAHGEA  120
IIGDGDDDDE ATSWLLLNPM KNGDGEQGNE ENGALFGGEV DEYLDLGEYN NQFDDGYDNQ  180
QQNYSVPQRS YGGGDSVVPI QLGLEGGYSY PTSMSQTVSL SSIDVGVVPE STTSEITVSH  240
TRPPKGTIDL FSSPPIQVPN QLTPMDREAR VLRYREKKKN RKFEKTIRYA SRKAYAETRP  300
RIKGRFAKRT DVEVEVDQMF SASLMAESSY GVVPSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02380.11e-112CO-like family protein