PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08165.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB_related

Protein Properties

Length: 849aa MW: 94866.6 Da PI: 9.6748

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.1	8.5e-08	44	79	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 rW eE +++da +++G++ Wk++a + +R+ +++ PIN08165.1 44 RWAMEELTRFYDAYRKYGKD-WKKVAGAVR-NRSSEMV 79 899*************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 849 aa Download sequence
MGPARKSKSV NRRYPNEVSP SKDGDSAKRS NSRKRKLCDM LGPRWAMEEL TRFYDAYRKY 60 GKDWKKVAGA VRNRSSEMVE ALYTMNRAYL SLPHGTASSA GLIAMMTDHY SNLAGSDSDE 120 ESNDGAGSSR KAHKRARGKV QPTTSKASDS QLVPRSQSAA SDYGCLSLLK KKRSGGSRPC 180 PVGKRTPRFP VSFSYDNMNG EKYDSPTRQG LKLKANANDD EVAHEIAIAL AEASQIGGSP 240 QVSRTPSKRA ESVMSSPFRH GQRKSLAEMT NTKISAGNMD EEDLEGSTEA DTGELSRHKP 300 AVMESISIGT GREKGRKLQE KKFEIDDDSE NHLDDIKEEC SGTEEGQRFG AMRGKLDAED 360 TEANISRSFI PSQRKKSKKV LFTRDEAPVF DALQTLADLS LMMPTENEDE SNVKLKDEDD 420 DHVDESESIE AVPMNQPKEK RRYSGVRMKG YHQPVSSSEV ASSKTSKPGK GVSNVGSVPE 480 ENKDPHQSTT KTRKRQKMQV SKIQKAEARP DIHLSDSPGV EAGDTGKKLM TKNKKSSEIG 540 SPNLMKISEN SASADLRKEA SDSTQSAVQI PAVNKVNLPT KVRSRRKMNL KKPQVLRDLK 600 FTDKTSDDNS NLPFASINDR ALTLKENLSR CLSNPRLRKW CTYEWFYSAI DYPWFAKREF 660 VEYLYHVGLG HVPRLSRVEW DVIKSSLGKP RRFSKQFLKE EKEKLNQYRD SVRKHYTELR 720 EGVREGLPAD FARPLSVGQR VIAIHPKTRE IHDGSVLTVD HSRCRVQFDR HDLGVEFVMD 780 IDCMPLNPFE NMPALLGRQT VAVDKSFENF NEQKINGRAQ ESMKLCPGDN ADNTGGISQV 840 SPLADPAIL

Sequence ? help Back to Top

Protein Sequence Length: 849 aa Download sequence

MGPARKSKSV NRRYPNEVSP SKDGDSAKRS NSRKRKLCDM LGPRWAMEEL TRFYDAYRKY  60
GKDWKKVAGA VRNRSSEMVE ALYTMNRAYL SLPHGTASSA GLIAMMTDHY SNLAGSDSDE  120
ESNDGAGSSR KAHKRARGKV QPTTSKASDS QLVPRSQSAA SDYGCLSLLK KKRSGGSRPC  180
PVGKRTPRFP VSFSYDNMNG EKYDSPTRQG LKLKANANDD EVAHEIAIAL AEASQIGGSP  240
QVSRTPSKRA ESVMSSPFRH GQRKSLAEMT NTKISAGNMD EEDLEGSTEA DTGELSRHKP  300
AVMESISIGT GREKGRKLQE KKFEIDDDSE NHLDDIKEEC SGTEEGQRFG AMRGKLDAED  360
TEANISRSFI PSQRKKSKKV LFTRDEAPVF DALQTLADLS LMMPTENEDE SNVKLKDEDD  420
DHVDESESIE AVPMNQPKEK RRYSGVRMKG YHQPVSSSEV ASSKTSKPGK GVSNVGSVPE  480
ENKDPHQSTT KTRKRQKMQV SKIQKAEARP DIHLSDSPGV EAGDTGKKLM TKNKKSSEIG  540
SPNLMKISEN SASADLRKEA SDSTQSAVQI PAVNKVNLPT KVRSRRKMNL KKPQVLRDLK  600
FTDKTSDDNS NLPFASINDR ALTLKENLSR CLSNPRLRKW CTYEWFYSAI DYPWFAKREF  660
VEYLYHVGLG HVPRLSRVEW DVIKSSLGKP RRFSKQFLKE EKEKLNQYRD SVRKHYTELR  720
EGVREGLPAD FARPLSVGQR VIAIHPKTRE IHDGSVLTVD HSRCRVQFDR HDLGVEFVMD  780
IDCMPLNPFE NMPALLGRQT VAVDKSFENF NEQKINGRAQ ESMKLCPGDN ADNTGGISQV  840
SPLADPAIL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	311	319	GREKGRKLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein