PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08303.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

CPP

Protein Properties

Length: 596aa MW: 64615.5 Da PI: 8.1524

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.8	1.2e-14	128	167	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C+N+ e+ PIN08303.1 128 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCHNNVEN 167 89************************.******9875 PP
2	TCR	51.2	2.5e-16	213	252	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e PIN08303.1 213 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNYE 252 589***********************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MEQREGGDLP PKKALQSEAS STAGVDFPAR KLVRQLDFTG FSGAASSVEQ QQLAKPSQPP 60 QPQSANPSEP TKQPHLQPPQ MLFMTVQQPP QPAAPPTHPA IRPLSKPESP RSRPRQNMNE 120 VKDGTPKKQK QCNCKHSRCL KLYCECFASG IYCDGCNCVN CHNNVENEAA RREAVEATLE 180 RNPNAFRPKI ASSPHGARDS REEAREGLLV AGKHNKGCHC KKSGCLKKYC ECFQANILCS 240 ENCKCMDCKN YEGSEERQAL FHGDHANNIA YIQQAANAAI TGAIGSSGYG SPPLNKKRKG 300 QDLFFGSTTK DPVQRLGQLQ QANHIKASVP SSSSSSALVA ARPGNTSALG PSKFTYRSLL 360 ADIIQPQDLK ELCSVLVVYS REAAKMLAEE RNAVEKQMED CRETSLASTS QGQSDSQKHS 420 AAEKALTNHP SLENHTEKAK PEESNSDGAD VSKGRPMSPS TLALMCDEQD TLFTTAASPN 480 RIEVQNNVSS QSPLERGMTE AYAEQERIVL TKFRDCLNRL ITLGEIKETK YSSLARTESG 540 SEKDLPVNSP SDAQTGTGNQ QPISNGIAKI AVPPERTSAV VTQTAAAAVN NVPFLK

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MEQREGGDLP PKKALQSEAS STAGVDFPAR KLVRQLDFTG FSGAASSVEQ QQLAKPSQPP  60
QPQSANPSEP TKQPHLQPPQ MLFMTVQQPP QPAAPPTHPA IRPLSKPESP RSRPRQNMNE  120
VKDGTPKKQK QCNCKHSRCL KLYCECFASG IYCDGCNCVN CHNNVENEAA RREAVEATLE  180
RNPNAFRPKI ASSPHGARDS REEAREGLLV AGKHNKGCHC KKSGCLKKYC ECFQANILCS  240
ENCKCMDCKN YEGSEERQAL FHGDHANNIA YIQQAANAAI TGAIGSSGYG SPPLNKKRKG  300
QDLFFGSTTK DPVQRLGQLQ QANHIKASVP SSSSSSALVA ARPGNTSALG PSKFTYRSLL  360
ADIIQPQDLK ELCSVLVVYS REAAKMLAEE RNAVEKQMED CRETSLASTS QGQSDSQKHS  420
AAEKALTNHP SLENHTEKAK PEESNSDGAD VSKGRPMSPS TLALMCDEQD TLFTTAASPN  480
RIEVQNNVSS QSPLERGMTE AYAEQERIVL TKFRDCLNRL ITLGEIKETK YSSLARTESG  540
SEKDLPVNSP SDAQTGTGNQ QPISNGIAKI AVPPERTSAV VTQTAAAAVN NVPFLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-161	CPP family protein