PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08543.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 293aa MW: 33322.3 Da PI: 5.9472

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.4	7e-08	14	43	1	30
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 rg W++eEde+l ++++ +G g+W+ ++++ PIN08543.1 14 RGLWSPEEDEKLNKYITTHGYGCWSEVPEK 43 788***********************9986 PP
2	Myb_DNA-binding	53.6	5e-17	70	114	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ ++ G++ W+ Ia++++ gRt++++k++w+++ PIN08543.1 70 RGRFTPEEEKLIISLHGAVGNR-WAHIASHLP-GRTDNEIKNYWNSW 114 89******************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MGRHSCCNQQ RVKRGLWSPE EDEKLNKYIT THGYGCWSEV PEKAAIIVCV EDVEWICVCR 60 ASKMREKLTR GRFTPEEEKL IISLHGAVGN RWAHIASHLP GRTDNEIKNY WNSWIKKKIR 120 RSSSSTSTST HQTSQLTYSQ NQHLEFLNQD LSTKSQLQDT LFSSPNPSFI FNNNGSTPEG 180 LNTNNTPSLD HIFQENEVLM KQHHDHAAMV QFMCPIYSSF LEIENSVVPI EGQIPSLDCA 240 QRNENMNVEW VDTQNCAGYF FWEQAELGQL GGEEMTASSS NMGTLLSPFP TSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	2e-62	MYB family protein