PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08594.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

ARR-B

Protein Properties

Length: 613aa MW: 66475.2 Da PI: 6.801

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08594.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	79.1	5.3e-25	211	263	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +++ Wt+ LH+rF+ea++++ G ++A+Pk+ile+m+v+gLt+e+v+SHLQkYR+ PIN08594.1 211 TKITWTNSLHNRFLEAIRSI-GLDRAVPKKILEVMNVPGLTRENVASHLQKYRI 263 6899**************.******************************6 PP
2	Myb_DNA-binding	30.7	7.5e-10	214	262	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++a++ G + +k+I + m+ g+t++++ s++qky+ PIN08594.1 214 TWTNSLHNRFLEAIRSIGLDraVPKKILEVMNvPGLTRENVASHLQKYR 262 6***********************************************7 PP
3	Response_reg	80	8.2e-27	25	133	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l+vdD+ + +++++ +l+k +y ev +++++++al +l+ k +Dl++ D+ mp+m+G++l + i++e +lp+++++a +ee +a++ l+ Ga PIN08594.1 25 ILVVDDDTTCLSIVAAILKKFKY-EVVTVKHPSDALCTLRIKGgaFDLVVSDVHMPDMNGFDLQQAIAQEF-HLPVVLMSADEEEGLAVKGLENGAA 119 89*******************.9********99666566*******************999.9******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 f++Kp++p++l++ PIN08594.1 120 YFIMKPVSPDDLRD 133 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MDGETITLSS SNSDELKRSV GSVSILVVDD DTTCLSIVAA ILKKFKYEVV TVKHPSDALC 60 TLRIKGGAFD LVVSDVHMPD MNGFDLQQAI AQEFHLPVVL MSADEEEGLA VKGLENGAAY 120 FIMKPVSPDD LRDLWQFASM KKKSKVVIEE SHEEEESSTG KNNSNEIAVS AGSVSEEIVL 180 NKRKSKKKYP RKEGSGAQKG ESSQSGSQKR TKITWTNSLH NRFLEAIRSI GLDRAVPKKI 240 LEVMNVPGLT RENVASHLQK YRIFLRRVSD ASYKVQHPGD HKGFSRNFGP TFESSGLTNP 300 STLILNRIRQ SQSPPGTHVA PMPNQASSSN LITQSGFGQS RLLGSSLKPN VGNTNLTRQN 360 DRLSTRLVQN NYQTFTSAEG NLLEDLSSGI STSIVMNLSG GYQVLPRGSI GTSSTITSIP 420 SNFTHGTNYV GYSISNIKHL AESGHGEIQP NATTRTDENI NVDQLSHYVG ASSSFGANNN 480 GGGQLSDIIA AYRVLAPSNP TIGPTFGLSE FGNILSGQPH SLEDSTLDAQ GNIQSHTQEN 540 RGETITSTNF YGGMSHLEIV PAIGRATNQE QITQGSINSQ EFGTHTQINE TAFLPPNQCV 600 AFLFCVPYID HKI

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MDGETITLSS SNSDELKRSV GSVSILVVDD DTTCLSIVAA ILKKFKYEVV TVKHPSDALC  60
TLRIKGGAFD LVVSDVHMPD MNGFDLQQAI AQEFHLPVVL MSADEEEGLA VKGLENGAAY  120
FIMKPVSPDD LRDLWQFASM KKKSKVVIEE SHEEEESSTG KNNSNEIAVS AGSVSEEIVL  180
NKRKSKKKYP RKEGSGAQKG ESSQSGSQKR TKITWTNSLH NRFLEAIRSI GLDRAVPKKI  240
LEVMNVPGLT RENVASHLQK YRIFLRRVSD ASYKVQHPGD HKGFSRNFGP TFESSGLTNP  300
STLILNRIRQ SQSPPGTHVA PMPNQASSSN LITQSGFGQS RLLGSSLKPN VGNTNLTRQN  360
DRLSTRLVQN NYQTFTSAEG NLLEDLSSGI STSIVMNLSG GYQVLPRGSI GTSSTITSIP  420
SNFTHGTNYV GYSISNIKHL AESGHGEIQP NATTRTDENI NVDQLSHYVG ASSSFGANNN  480
GGGQLSDIIA AYRVLAPSNP TIGPTFGLSE FGNILSGQPH SLEDSTLDAQ GNIQSHTQEN  540
RGETITSTNF YGGMSHLEIV PAIGRATNQE QITQGSINSQ EFGTHTQINE TAFLPPNQCV  600
AFLFCVPYID HKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-51	ARR-B family protein