PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08599.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 236aa MW: 26781.3 Da PI: 9.3477

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	1e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv ++++ G+g+W++++ g+ R+ k+c++rw +yl PIN08599.1 15 KGPWTPEEDIILVSYIQENGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 62 79****************************99**********97 PP
2	Myb_DNA-binding	46.6	7.6e-15	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ ++++ +lG++ W++Ia++++ +Rt++++k++w+++l PIN08599.1 68 RGNFTPHEEGMIIHLQSLLGNK-WAAIASYLP-RRTDNDIKNYWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MGRAPCCNDK VGIKKGPWTP EEDIILVSYI QENGPGNWRS VPTNTGLLRC SKSCRLRWTN 60 YLRPGIKRGN FTPHEEGMII HLQSLLGNKW AAIASYLPRR TDNDIKNYWN THLKKKLKIF 120 PSATNNIPQL ASASTTYNSH SGLNKLTEKS SVYASSAENI SRLLEGWKDK LTQKIPESHD 180 DHQGEKGIKS DDQEKFGFVH EQNKQKLTEN NNSPLTFLEK WLLDESAGME QLPSVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	5e-93	MYB family protein