PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08600.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 235aa MW: 26645.1 Da PI: 9.1016

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54	3.7e-17	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv ++++ G+g+W++++ g+ R+ k+c++rw +yl PIN08600.1 15 KGPWTPEEDIILVSYIQENGPGNWRSVPTNAGLLRCSKSCRLRWTNYL 62 79****************************99**********97 PP
2	Myb_DNA-binding	45.9	1.3e-14	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ ++++ +lG++ W++Ia++++ Rt++++k++w+++l PIN08600.1 68 RGNFTPHEEGMIIHLQSLLGNK-WAAIASYLP-QRTDNDVKNYWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MGRAPCCNDK VGIKKGPWTP EEDIILVSYI QENGPGNWRS VPTNAGLLRC SKSCRLRWTN 60 YLRPGIKRGN FTPHEEGMII HLQSLLGNKW AAIASYLPQR TDNDVKNYWN THLKKKLKIS 120 PSATNNNSQL ASASTTYDSQ SSPNKLTGYS SVYASSAENI SRLLEGWKNK FSRKIPESHD 180 DHQGEKGIKT DDREKFGLVH EQNKLKLIED DPPLMFLEKW LLDESPSMEQ LPSVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	1e-93	MYB family protein