PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08678.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 222aa    MW: 25788.8 Da    PI: 9.7218
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.74.2e-13311081599
                 -EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  15 rlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  l +p  f  +h ++k  ++   tl+++ g+ W+vkl   + ++++++++GW+eFvk++ L   + ++Fk++++++f   v +f+k
  PIN08678.1  31 ELKIPSAFK-KHlSNK--QTNSATLRSPCGN-WKVKL--LQEGSEIYFGQGWQEFVKDHSLGKFEYLLFKYNEEMSF--DVVIFDK 108
                 588999996.663545..4457999999885.*****..8999999*************************999999..8888887 PP
2B355.69.8e-18136221898
                 -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  +v++++ l +p  f + h ++   ++t++l++++g  W v++i++ + ++ ++++GWk F+++n +k g +++F+l++  + ++ v+vf+
  PIN08678.1 136 CNVGRKCSLQIPQAFSKMHLSS--IKQTMILQNSKGIPWLVNVIINSN-KQLLISGGWKAFADDNSIKKGNVCIFELVE--QNKMQVHVFS 221
                 478999**********999433..4469***************65555.5799***********************975..6677999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MEKDKLKMDE WESPDRRPCF YRIIWLPNLT ELKIPSAFKK HLSNKQTNSA TLRSPCGNWK  60
VKLLQEGSEI YFGQGWQEFV KDHSLGKFEY LLFKYNEEMS FDVVIFDKNG CKKSYQESPS  120
TFISSFPFFK HRINNCNVGR KCSLQIPQAF SKMHLSSIKQ TMILQNSKGI PWLVNVIINS  180
NKQLLISGGW KAFADDNSIK KGNVCIFELV EQNKMQVHVF SA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31650.15e-16B3 family protein