PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08783.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Trihelix
Protein Properties Length: 313aa    MW: 35346.6 Da    PI: 5.1081
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix53.18.7e-1726116186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +Wt++ + +L++a  ++  +l+rg+l++++W+ev++++     + ++ +r+ +qCk++++ l+k+yk +k+   + + +++s++p+f+qle
  PIN08783.1  26 CWTEEATATLVDAWGRRYLELNRGNLRQKDWQEVADAVnarhgHTKKTRRTDVQCKNRIDTLKKKYKVEKAKIAESNGTQTSSWPFFSQLE 116
                 8*************************************99888888999**********************999998999999******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MGDLTESSTP QPQPPSSRQV PFREDCWTEE ATATLVDAWG RRYLELNRGN LRQKDWQEVA  60
DAVNARHGHT KKTRRTDVQC KNRIDTLKKK YKVEKAKIAE SNGTQTSSWP FFSQLEMLVG  120
SNFNKHQNKI TPVSVSATPL QSSQSTPPLS LPSPPMAVPL PYRKPLTSAM VTPVVLPQKR  180
PMALPAVDES YFRRNYSAMA AAAAAAEDEA DADEDDGESE GEEAEGSEDR AVEEEEEGEE  240
GMRRLAKAIE RFGEIYEKVE SMKQKQMVEL EKQRMQFAKD LEVQRMRLFM DTQVQLEKIK  300
QAKRSGSSDD IYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-34Trihelix family protein