PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08848.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 279aa    MW: 30893.8 Da    PI: 9.153
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.7e-12179224655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L+el+P+     +k  + a++Le+Av Y+k Lq
  PIN08848.1 179 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVAYVKFLQ 224
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MQPPRGSGST EQNRSSGGLA RYRSAPATWL EALLESDEEQ SEAVLDIPKP PPSASASDVD  60
LELLESAGPG GLSNFLRQNS SPAEFLSLLN SSDGYFSNLG IPANYDYVSS PSSAKRPREA  120
EDLDKLPPKL SPSSSTSSKR EKVGQFQGGP LDAEMEKLLE DSVMCRVRAK RGCATHPRSI  180
AERVRRTRIS DRIRKLQELV PNMDKQTNTA DMLEEAVAYV KFLQKQIQVC GIIYNFTQEN  240
LQRNSEDILR KVKHLLPAMC SNQALRRSSR SIKRTANAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.15e-53bHLH family protein