PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09256.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 196aa    MW: 21948.7 Da    PI: 4.5868
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09256.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-2053102355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+++AeIrd s+++ + r++lg+f+taeeAa a+++a+ +++g
  PIN09256.1  53 YRGVRRRP-WGKYAAEIRD-STRN-SVRVWLGTFDTAEEAALAYDQAAFAMRG 102
                 9*******.**********.3433.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MHPYSDPLHL PFNENDSQEM LLYGVLEEGA AAASCGGGGY SPESQSSNGE VMYRGVRRRP  60
WGKYAAEIRD STRNSVRVWL GTFDTAEEAA LAYDQAAFAM RGTEAVLNFP VEVVWESLKE  120
MRLEAAESSP VLALKKRHSM QRKMVCRKKK EMKDMVVLED LGSDYLEELL SMSESSEPGC  180
QSPLDEVIST FFQNFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135150KKRHSMQRKMVCRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-45ERF family protein