PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09344.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YC
Protein Properties Length: 136aa    MW: 15733.2 Da    PI: 9.973
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09344.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC43.76e-1416971797
       NF-YC 17 knhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrt.difdflvdivp 97
                ++ e+P  r+kki+k d+d++++ +ea  l++ + elf+  l+ +s   a e+k+rt++   +  a +r   + dfl+d  p
  PIN09344.1 16 HKLEIPTRRVKKIMKLDKDINKVNSEALFLVASSTELFLQFLAEKSADVAMEKKKRTIRIEHLRLAAKRHrPTADFLLDCLP 97
                45689**********************************************************98887761689*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MADQEEENPN AIEEPHKLEI PTRRVKKIMK LDKDINKVNS EALFLVASST ELFLQFLAEK  60
SADVAMEKKK RTIRIEHLRL AAKRHRPTAD FLLDCLPVPP QPSEQNPPKD RAKSRPDKKR  120
VPFETRSIDA FFQKCT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.15e-37NF-YC family protein